Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEFNGEYPDHDLIEELVNHYCFEHEI
2P0G Chain:A ((43-80))
------------------DTGGRFEIFCNGVQIWERK--QEGGFPEAKVLKQRVRDLI-----
General information:
TITO was launched using:
RESULT:
Template:
2P0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9871 for 190 contacts (-52.0/contact) +
2D Compatibility (PS) -4165 + (NN) -2557 + (LL) 2060
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -17233.0 ( -90.70 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_2P0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P0G-query.scw
PDB file :
Tito_Scwrl_2P0G.pdb
: