Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAG-----------GQPWI---------------DQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESV-LVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVFPLSGLVIGHPADRSAKKPRLPQEAVNHQETYLNQDELTSHIQAYDEQMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREMLEKQGFKVEK
3GH8 Chain:A ((56-247))--EFYELLNKRRSVRFISSEHVPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEINYMKRMGKRWVTDLKKLRTNWIKEYLDTAPVLILI----------FKQVHGFA---ANGKKKVHYYNEISVSIACGLLLAALQNAGLVTVTTTPLNCGPR-LRVLLGRPSHEKLLVLLPVGYPS-RDATVPDLKRKALD-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 655 -100063 -152.77 -606.44
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -152.77
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_3GH8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GH8-query.scw
PDB file : Tito_Scwrl_3GH8.pdb: