Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKMHDKLVSDIGELEARKNMIKAKWAVAKTQERMNKLGASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADLSAKYDTGGSSQVDDELAALKAKMMLDK
5FI4 Chain:B ((164-273))-------------------EKSREYDRLYEEYTRTSQ----EIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRR-------RLEEDLKKQAAEYREIDKRMNSIK---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 155 -7469 -48.19 -67.90
target 2D structure prediction score : 0.92
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -48.19
2D Compatibility (Sec. Struct. Predict.) : 0.92
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_5FI4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FI4-query.scw
PDB file : Tito_Scwrl_5FI4.pdb: