Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRNKEKGFPYENENKFQGEPRAKDDYASKRADGSINQHPQERMRASGKR
1VPP Chain:X ((1-20))---------------RGWVEICAADDYGRCLTEAQ---------------


General information:
TITO was launched using:
RESULT:

Template: 1VPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 14 420 29.96 20.98
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain X : 0.70

3D Compatibility (PKB) : 29.96
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_1VPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VPP-query.scw
PDB file : Tito_Scwrl_1VPP.pdb: