Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIPLHENLAGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAVVKEITAAGGTACAVAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLLINQDGTFTSRSHKIIAGTPMKRFGKPEDLLGTLLWLADESYSGFVTGITVPVDGGFMAYSGV
3UF0 Chain:A ((28-272))------SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAG------IIARAPAEEVSLGR---------WREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE-----RAAEITARIPAGRWATPEDMVGPAVFLASDAAS-YVHGQVLAVDGGWLA----


General information:
TITO was launched using:
RESULT:

Template: 3UF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1377 -151835 -110.27 -619.73
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -110.27
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3UF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UF0-query.scw
PDB file : Tito_Scwrl_3UF0.pdb: