Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTRKPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLL---PSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQNKNAGESSLK
4AP9 Chain:A ((6-200))-QFMKKVAVIDIEGTLTDFEFWREMARITGKREIEELLEKGLSGEV---EWLDSLLKRVGLIRGIDEGTFLRTRE-KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPFKE-LG--DEFMANRAIFEDGKFQGIRLR----------FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGRE------IPGADLLVKDLKELVDFIKNLK-----------------


General information:
TITO was launched using:
RESULT:

Template: 4AP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 971 -126039 -129.80 -656.45
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -129.80
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4AP9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AP9-query.scw
PDB file : Tito_Scwrl_4AP9.pdb: