Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVIHNGKAGLLGLSVQDVPSTKPGYGEVKVKLKSAGLNHRDL------------FLMKNKSEQD-------PHMILGSDGAGIIEEIGEGVKNVTVQTEVVIFPTLNWDLTEN-------VPPVPEILGGPSD-GTLAEYVIIPSQNAIKKPAYLSWEEAGVLPLSALTAYRALFTK--GQLKKGEHLLIPGIGSGVATYALFMAKAIGATVSVTSRSEEKRKKALKLGADYAFDS----YSNW-DEQLQ-----------------GKKIDVVLDSIGPALFSEYFRHVKPNGRIVSFGASSGDNLSFPVRSLFFPQVNVLGTSMGSGEEFQAMLAFIDKHKLRPVIDRIYPLEKACEAYKRMQEGRQFGNIGIVME
3KRT Chain:A ((58-421))--------------IHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH-CLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC-


General information:
TITO was launched using:
RESULT:

Template: 3KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1725 21160 12.27 67.60
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 12.27
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_3KRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KRT-query.scw
PDB file : Tito_Scwrl_3KRT.pdb: