Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNFLLDLFTNWTFDKVLDYTLAAVI-------WSVFKSRSKQ---NKYPGYFEKIRRYRN---LHPLLRSL---SMRVLLSITIHPYMFS----------------------------------------------------------------------------
4EI7 Chain:A ((3-384))GNFSEIESQGNISLKFGFLGLGMGGCAIAAECANKETQIKNNKYPYRAILVNTNSQDFNKIEIKNTGNVRKIQLEGYEQGAARNPQVGEEAFVKHETKIFEAVKQEFEDRDFIWITCGLGGGTGTGALLKAIEMLYEHDYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSALSIVTSPLRAGRLYNFSFLNQMENFLKERTPYVDERPIAPYVNKHTTKKEEDIVKFYSVVAGLPLPKRVSDIIDEITRIKEEREQAN


General information:
TITO was launched using:
RESULT:

Template: 4EI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 285 11898 41.75 160.78
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 41.75
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.049

(partial model without unconserved sides chains):
PDB file : Tito_4EI7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EI7-query.scw
PDB file : Tito_Scwrl_4EI7.pdb: