Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAARTNISILAVHLPAPSSFGNYDSYEGFATKPG-----EISWRFKLYPTPEEESPSWAGRIDTISAEMKNVKVQVRLSNSSTQKLGPSILTKNIESCY
1EFN Chain:B ((18-150))-----------------RPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIH-------SQRRQDILDLWIYHTQ----GYFPDWQNYTPGPGVRYPLTFGWCYKLVPVREVLEWRFDSRLAF-----------------------HHVARELHPEYF


General information:
TITO was launched using:
RESULT:

Template: 1EFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 380 -11818 -31.10 -119.37
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -31.10
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_1EFN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EFN-query.scw
PDB file : Tito_Scwrl_1EFN.pdb: