Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MLLVVIFGLVALFALWGVLRSVRNKNILGFLLAG------ATLFVFGWFTVMTVI------------NSGYPTAH--------
4CU5 Chain:A ((186-270))MYKHTIVYDGEVDKISATVVGWGYNDGKILICDIKDYVPGQTQNLYVVGGGACEKISSITKEKFIMIKGNDRFDTLYKALDFINR


General information:
TITO was launched using:
RESULT:

Template: 4CU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 227 -29169 -128.50 -511.74
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -128.50
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_4CU5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CU5-query.scw
PDB file : Tito_Scwrl_4CU5.pdb: