Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------MKKGQLFIGALTCLVASMSWGAMFPVADHALEFVD----------------PFYFSFIRYGVVTIM-------LVILLLVREGKKSFHLEGKAKWIILFGVMAFTIYNVLIFLGQRLMGK--SGIMTASIAEALM----PMLSIVILWGYKHVK-PKKYTMISILIAFLGAS-----MVITKG--NISFFFSLGDHLFSILFIFIGVLGWVVY--TMGGQIFREWSTL--RYSTLTCLFGTAITG-IMTAILTAQGYVSVPSIKVIAAIKYDFLFMITLPGIIALLSWNYG-IKILSSING-----ILFI----NFVPITTLLIMVIKGYNITAFDIVGTLFVIIG--LILNNIYQRKEDYKQVLQKEKTNLTIT---
4O2X Chain:A ((5-483))EGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIA-YPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVITSAWKVILYNDDIHNFTYVTDVIVKVVGQISKAKAHTITVEAHSTGQALILSTWKSKAEKYCQELQQNGLTVSIIHES


General information:
TITO was launched using:
RESULT:

Template: 4O2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1671 -115129 -68.90 -359.78
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -68.90
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.189

(partial model without unconserved sides chains):
PDB file : Tito_4O2X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O2X-query.scw
PDB file : Tito_Scwrl_4O2X.pdb: