Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKRKNKKNSKAAEKALKVTINGKEETVYEQETPETEANKSMTFSNWEEKRQAEQEVAASQEHPDEDEFNWDSEEDKVFKEDPKVVPPFQKKKTKLYAKGKTGAAKPVKRVAATIAFAAVIGTGLGLFALNISGNKEASAPASLEDSLGSQTAKAGDTSADKQTSGAEKQAAQTEGTYKTYAVQAGKFSNEKGAETLT-------EQLTEKGYSAVSLSKDDGYTYVIAGLASEKEVSQQLGQVLIDSDFEAWGGKELSLSIESDMTDSFKETAELAAKAILDEDITKASVEKIEKSLGETKASETGEKKAILQALKELEDPSAEAGWKAQQELLAVVK
5D7J Chain:A ((10-114))------------------------------------------------------------------------------------------------------------------------------------------------------------------EMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVM-DSNFQLIWGAGTKLIIKPDIQN-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5D7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 446 16848 37.78 171.92
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 37.78
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_5D7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D7J-query.scw
PDB file : Tito_Scwrl_5D7J.pdb: