Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIIAINAGSSSLKFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEK--NTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNE-IDGIGHRVVHGGEKFSDSVLLTDETIKEIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLNTLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSYAARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALN---NVRGEEAFISYPHSPVKVMIIPTDEEVMIARDVVRLAK
4FWO Chain:A ((20-407))---VLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAF--LSINGDKPINLAHSNYEDALKAIAFELEK-------RDLTDSVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKDSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANP-SQVICAVIPTNEEKMIALDAIHLGN


General information:
TITO was launched using:
RESULT:

Template: 4FWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2050 -52989 -25.85 -138.71
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -25.85
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_4FWO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FWO-query.scw
PDB file : Tito_Scwrl_4FWO.pdb: