Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPGSVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTANPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKELFPDITVHVVEPAGSPVLSGGKPGAHKLVGTSPGFIPPILNEDVYDEIIKISDEDAYTTTRRLAAEEGILVGPSSGAACFAAIETAKR-LSPDKVVVCMTADTGERYLSTDLWSFI
3RR2 Chain:A ((1-299))-MTIAENITQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAEKAGLIKPDTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVLTP----MAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTD--GK-VDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPV-----KGPHPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLVGISSGAAVWAARELAHRPENAGKLIVVVLPDFGERY---------


General information:
TITO was launched using:
RESULT:

Template: 3RR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1611 -145223 -90.14 -502.50
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -90.14
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.597

(partial model without unconserved sides chains):
PDB file : Tito_3RR2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RR2-query.scw
PDB file : Tito_Scwrl_3RR2.pdb: