Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDYRRDGQNDQHQTEPSHTEQQNTENQKLIGHSEQELLDAPVSYEAGRQETASALEMEKQETAVKKEKKRRAAWLSPILGGIIGGGLMLGIAPYLPSDQNQATETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVGISNIQTSQNNTFGTGGGSSSESESGTGSGVIFKKDSDKAYIITNNHVVEGANKLTVTLYNGETETAKLVGSDTITDLAVLEISGKNVKKVASFGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGINSLKVSESGVESLGFAIPSNDVEPIV-----DQLLQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIKSEDVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGKTKTLNATLTKQTESSSS
3NZI Chain:A ((16-214))-------------------------------------------------------------------------------------------------------------------------------IADVVEKIAPAVV---HIELFRKLPF-----SKREVPVASGSGFIVSED---GLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQ--NTVTTGIVSTTQRG-GKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTESHDR-----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1150 -79197 -68.87 -408.23
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -68.87
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_3NZI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NZI-query.scw
PDB file : Tito_Scwrl_3NZI.pdb: