Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVASRSAKSALHSNKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIV------EPTKSALQTPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDV-KGGMMAAEHLLSLGHTHMMGIFKA--DDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKES--KLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIVGYDDSHFAQISEVKLTSVKHPKSVLGKAAAKYVIDCLEHKKPKQEDVIFEPELIIRQSARKLNE
2PUE Chain:A ((50-329))--------------------------------------------------------------------ARSLK--VNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLE----------EYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREI-GVIPGPLEQNTGAGRLAGFMKAMEE-AMIKVPESWIVQGDFEPESGYRAMQQILS-----QPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRS------


General information:
TITO was launched using:
RESULT:

Template: 2PUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1475 -207 -0.14 -0.77
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -0.14
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_2PUE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PUE-query.scw
PDB file : Tito_Scwrl_2PUE.pdb: