Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKALIPKQHGAWAMLLIPFLLGMVKGGPVIWHIPLF---------LGWLFLYLAVYPVTLALKKKQSKPYQKWMCYYGFPTCCF--------LMISVFHKPPLIWVGVSLLPLFLIHMYFARRKNERALLNDVAGVLFFCSGGFASCWLG--------------MGTLDGWAWFIFLQSALFFIGSSFYVKSVIRERKNRAFAYWSWGYHLLLPFLSALFGAGWAFLAFIPSSLRAWFFHGRDWPVKTIGILEIVNACFFLAVMCLFITR-------
4Q2E Chain:A ((29-290))ITASVVAPFVVLCFVSYESLIGLVSAILILAGYELITLEMKERDARFFYVILLALYPVLYGLVFEEPTQPLSILFITGVVFSLITDKDPSQVFKTVAAFSIALIYVTFFLSFFLPIYRDF---GAANALLVLTSTWVFDSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRLVVNDLLSVNVICFRTFLPFA----ATVAIMDTFGDIFECALKRHYGVKDSGKTLPGHG--------GMLDRIDGLLFVAPVSYIVFKILEGVVR


General information:
TITO was launched using:
RESULT:

Template: 4Q2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 826 -139334 -168.68 -622.02
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -168.68
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.142

(partial model without unconserved sides chains):
PDB file : Tito_4Q2E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q2E-query.scw
PDB file : Tito_Scwrl_4Q2E.pdb: