Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSL--PVLTSYFTFLNAPAIGAVSW-AWLFAI-----------AQFAMTWILSTV-----YSRRAAHFDKYVSALKEDLKGEQT
2LGE Chain:A ((1-129))GDDDEPGGKGAMYEVTIEQS---GDFRSFIKSVVVVANGTQLKDGATGESLASPVILSDEELAVEKVTLSTTGKAIEFAVSGGVVDGEDGVVNEPMQWVVTVYKNGKEIEKKSLVFRDGKEISTDDLNLYYN


General information:
TITO was launched using:
RESULT:

Template: 2LGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 379 -18526 -48.88 -187.13
target 2D structure prediction score : 0.08
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -48.88
2D Compatibility (Sec. Struct. Predict.) : 0.08
1D Compatibility (Hydrophobicity) : 0.67
QMean score : -0.027

(partial model without unconserved sides chains):
PDB file : Tito_2LGE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LGE-query.scw
PDB file : Tito_Scwrl_2LGE.pdb: