Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPYLKRVLLLLVTGLFMSLFAVTATASAQTGGSFFDPFNGYNSGFWQKADGYSNGNMFNCTWRANNVSMTSLGEMRLALTSPAYNKFDCGENRSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPT---DGTPWDEIDIEFLGKDTTKVQFNYYTNGAGNH---EKIVDLGFDAANAYHTYAFDWQPNSIKWYVDGQ-LKHTATNQIPTTPGK--IMMNLWNGTGVDEWLGSYNGVN-PLYAHYDWVRYTKK
3AXD Chain:A ((7-170))--------------------------------------------------------------------------------------FSGAELYTLEEYQYGKFEARMKMAAASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGKSPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQVSNLTGTQGLRFNLWSSESA-AWVGQFDESKLPLFQFINWVKVYK-


General information:
TITO was launched using:
RESULT:

Template: 3AXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 783 13748 17.56 89.27
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 17.56
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_3AXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AXD-query.scw
PDB file : Tito_Scwrl_3AXD.pdb: