Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDV-VANLPQALQDARTQRRSKHHLWIFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRS
1UJ5 Chain:A ((4-77))
----------PLESYKKEAAHAAIAYVQ--DGMV-VGLGTG-STARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLP----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19893 for 480 contacts (-41.4/contact) +
2D Compatibility (PS) -7991 + (NN) -2156 + (LL) 5496
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -30094.0 ( -62.70 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_1UJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJ5-query.scw
PDB file :
Tito_Scwrl_1UJ5.pdb
: