Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHPCATDPELWFGYPDDD-----GSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAA |
5FVD Chain:B ((1-28)) | ------------MSFPEGKDILFMGNEAAKLAEAFQKSLR-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1950 for 68 contacts (28.7/contact) +
2D Compatibility (PS) -2647 + (NN) -3134 + (LL) 8420
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 3089.0 ( 45.43 by residue)
QMean score : 0.436
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