Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALL-FNPDRAADPMAIAGAFAVLFLPYSLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILAVGAGDVPLLVGALVANGLARFVASGLSAALP---HVVPREQVVTMNSVAIASGAVSAFLGA---NFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVTGWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWGRYATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQDALFW--VSYILSITVAAALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR |
4Q4D Chain:A ((7-323)) | --QIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGF--PLDKAVAYAKLRNPFVINDL--NMQYLIQDRREVYSILQAEGILLP---------------------------RYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGG---------------SQRLFRKIGSRSSVYSPESNVRK-TGSYIYEE---FMPTDGTDVKVYTVGPDY---------------------AHAEARK----------------SPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFK----QTVCGFDLLRAN-------GQSYVCDVN----GFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWS----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242405 for 2410 contacts (-100.6/contact) +
2D Compatibility (PS) -32552 + (NN) -3045 + (LL) 10880
1D Compatibility (HY) -10000 + (ID) 3250
Total energy: -280372.0 ( -116.34 by residue)
QMean score : 0.151
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