Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTP--RQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 4BMV Chain:A ((6-190)) | ---------------TVLITGASSGIGATYAERFARRGHDLVLVARDKVRLDALAARLRDES-GVAVEALQADLTRPADLAAVEIRLREDA-RIGILINNAGMAQSGGFVQQTAEGIERLITLNTTALTRLAAAVAPRFVQSGTGAIVNIGSV---VGFAPEFG----------MSIYGATKAFVLFLSQGLNLELSPSGIYVQ-AVLPAATRTEI----------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92005 for 1502 contacts (-61.3/contact) +
2D Compatibility (PS) -20127 + (NN) -9221 + (LL) 7620
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -124733.0 ( -83.04 by residue)
QMean score : 0.445
|
|
|