Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITAFLVGHRR-TRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAG---LDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALM-SGVLLAVAFSVLIRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAA-HDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPP-FAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVGLP |
| 3RKO Chain:L ((74-470)) | --------------------------------------------------------NIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEE--------GYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGT--------LNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLIARTHGLFLMT---PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQA---WDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAH-AVKGVTHSLPLIVLLILSTFVGAL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -492542 for 3664 contacts (-134.4/contact) +
2D Compatibility (PS) -41910 + (NN) -27838 + (LL) 6788
1D Compatibility (HY) -27600 + (ID) 5150
Total energy: -588252.0 ( -160.55 by residue)
QMean score : 0.371
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