Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDQPWNANIHYDALLDAMVPLGTQCVLDVGCGDGLLAARLARRIPYVTAVDIDAPVLRRAQTRFAN-APIRWLHADIM---TAELPNAGFDAVVSNAALHHIED---TRTALSRLGGLVTPGGTLAVVTFVTPSLRNGLWHLTSWVACGMANRVKGKWEHSAPIKWPPPQTLHELRSHVRALLPGACIRRLLYGRVLVTWRAPV
3OFK Chain:A ((31-150))
-DNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAEL----FDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHL-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78711 for 815 contacts (-96.6/contact) +
2D Compatibility (PS) -12124 + (NN) -6180 + (LL) 5832
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -99383.0 ( -121.94 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_3OFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OFK-query.scw
PDB file :
Tito_Scwrl_3OFK.pdb
: