Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAG----VLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
4LLH Chain:C ((221-292)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACSLGLGALQIGAGL--SAANI---PSDWTIVGIVSVLTLAFIFSAIS----GIQYLSNANMVLAALLAIFVF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36884 for 275 contacts (-134.1/contact) +
2D Compatibility (PS) -6046 + (NN) -319 + (LL) 12132
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -40667.0 ( -147.88 by residue)
QMean score : -0.011
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