Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNP-QKFSARLLCRDLQVIERTWRYLKVPCVIEFWDENGG--AASGEIELAALNIP |
| 3F5O Chain:A ((78-139)) | ------------------------------------------------------------------------------------------------------------------GAPGVSVDMNITYMSPAKLGEDIVITAHVLKQG-----KTLAF--TSVDLTNKATGKLIAQGRHTKHLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16590 for 322 contacts (-51.5/contact) +
2D Compatibility (PS) -5946 + (NN) 2990 + (LL) 9016
1D Compatibility (HY) 3200 + (ID) 200
Total energy: -7530.0 ( -23.39 by residue)
QMean score : 0.334
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