Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
1M44 Chain:B ((2-181))
-HTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
General information:
TITO was launched using:
RESULT:
Template:
1M44.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129795 for 1375 contacts (-94.4/contact) +
2D Compatibility (PS) -19343 + (NN) -8512 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 9000
Total energy: -190442.0 ( -138.50 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1M44.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M44-query.scw
PDB file :
Tito_Scwrl_1M44.pdb
: