Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVR--VRPTAASLPGVEMVTATVAHIDIAAQ-VVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEAL--EHGRIAV-AIAGVPFKCPAAPFEAAFLIAAQLGDRYATGTVQIDTF-TPDPLPMPVAGPEVGEA---LVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTSE-------PFDLLAVVPPH--VPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDAT----VLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHF-TGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
| 3T14 Chain:A ((4-406)) | -SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIR-HYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPG-SDPHEGPVQ-SIATVDHAERAFAEYQALLREPGPIVIGAMAGA--SCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVCFADMGDRGAAFIALPQLKPRKVDVFAY--GRWVHLAKVAFEKYFIRKMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206974 for 3314 contacts (-62.5/contact) +
2D Compatibility (PS) -41753 + (NN) -24115 + (LL) -164
1D Compatibility (HY) -16400 + (ID) 5400
Total energy: -294806.0 ( -88.96 by residue)
QMean score : 0.416
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