Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
3I4P Chain:A ((1-45))
--------------------MDRLDRKILRILQE---DSTLAVADLAKKVGLSTTPCWRRIQKMEEDG----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3I4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19844 for 273 contacts (-72.7/contact) +
2D Compatibility (PS) -5066 + (NN) -2563 + (LL) 5012
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -25911.0 ( -94.91 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3I4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I4P-query.scw
PDB file :
Tito_Scwrl_3I4P.pdb
: