Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVTVGSMNERVPDSSGLPLRAMVMVLLFLGVVFLLLVWQALGSSPNSEDDSSAISTMTTTTAAPTSTSVKPAAPRAEVRVYNISGTEGAAARTADRLKAAGFTVTDVGNLSLPDVAATTVYYTEVEGERATADA-----------VGRTLGAAVELRLPELSDQPPGVIVVVTG |
4NS3 Chain:C ((205-263)) | --------------------------------------------------------------------------------------------------------------------AITPFNFTSIAGNLPTAPALMGNTVIWKPSITQTLAAYLTMQLLEAAGLPPGVINLVTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5037 for 253 contacts (19.9/contact) +
2D Compatibility (PS) -5523 + (NN) -3775 + (LL) 7476
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -1385.0 ( -5.47 by residue)
QMean score : 0.133
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