Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGPPRLSSDLDALLRRVAGHDQAAFAEFYDHTKSRVYGLVMRVLRDTGYSEETTQEIYLEVWRNASEFDSAKGSALAWLLTMAHRRAVDRVRCEQAGNQREVRYGAANVDPASDVVADLAIAGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSLRNCLDVS
3N0R Chain:A ((20-160))
----------------------EMHLLARLAPHLPYIRRYARALTGDQATGDHYVRVALEALAAGELVLDA-NLSPRVALYRVFHAIWLSSGA----GHDQG---------------------LHAGDDAAQRLMRIAPRSRQAFLLTALEGFTPTEAAQILDCDFGEVERLIGDAQAEIDAELA--
General information:
TITO was launched using:
RESULT:
Template:
3N0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48696 for 1016 contacts (-47.9/contact) +
2D Compatibility (PS) -14606 + (NN) -4554 + (LL) 3168
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -66738.0 ( -65.69 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3N0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0R-query.scw
PDB file :
Tito_Scwrl_3N0R.pdb
: