Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR |
| 1KJK Chain:A ((11-59)) | ------------------------------------------------------------------------------------------------------------------------DLP----PNLYIRN----NGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGH-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13856 for 282 contacts (-49.1/contact) +
2D Compatibility (PS) -5534 + (NN) -3156 + (LL) 12964
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -13432.0 ( -47.63 by residue)
QMean score : 0.402
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