Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAA----VMGNIVAQGNSDSIGCRITV--DGKVRAERVSNEVNAYTYCLVKSA-
3T7Z Chain:A ((1-119))
MIYVTFTPYGAFGVK---------------------------DNKEVSGLEDIEYKKLFNEEEIPDIMFKLKTQPNKIADELKEEWGDEIKLETLSTEPFNIGEFLRN-NLFKVGKELGYFNNYDEFRKKMHYWSTELTKKVIKSYA
General information:
TITO was launched using:
RESULT:
Template:
3T7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53097 for 770 contacts (-69.0/contact) +
2D Compatibility (PS) -12022 + (NN) -4516 + (LL) 688
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -72197.0 ( -93.76 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_3T7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T7Z-query.scw
PDB file :
Tito_Scwrl_3T7Z.pdb
: