Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIGTRGSLLATTQAATVRDAL-IAG-GHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLD-DVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH |
| 4MLV Chain:A ((5-307)) | KIIVGSRRSKLALTQTKWVIEQLKKQGLPFEFEIKEMV-------------------KEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQVPIAGYGRILD---G--G---NIELTSLVASPDGKTIYKEH--ITGKDPIAIGSEAAERLTSQGAKLLIDRVK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116648 for 2354 contacts (-49.6/contact) +
2D Compatibility (PS) -31232 + (NN) -22394 + (LL) 1268
1D Compatibility (HY) -19600 + (ID) 5300
Total energy: -193906.0 ( -82.37 by residue)
QMean score : 0.487
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