Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALAPLLAGV--DLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFE--DGGQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAIT--GHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR |
| 3KO8 Chain:A ((1-303)) | MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNL---SSGRREFVNPSAE-LHVRDLKDYS-WGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDA--------DVIPTP----------------------------EEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRN-------PNVLEVL---QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLG--LRPEIRLV-----GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163649 for 2541 contacts (-64.4/contact) +
2D Compatibility (PS) -30837 + (NN) -14837 + (LL) 1592
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -232331.0 ( -91.43 by residue)
QMean score : 0.508
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