Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGRGRLGH
2W1A Chain:D ((12-90))
--------------------------PEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGRGRLGH
General information:
TITO was launched using:
RESULT:
Template:
2W1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3392 for 397 contacts (-8.5/contact) +
2D Compatibility (PS) -9309 + (NN) -8272 + (LL) 1856
1D Compatibility (HY) -10000 + (ID) 3950
Total energy: -33067.0 ( -83.29 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2W1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W1A-query.scw
PDB file :
Tito_Scwrl_2W1A.pdb
: