Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
2OAR Chain:B ((24-148))
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTN--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40261 for 626 contacts (-64.3/contact) +
2D Compatibility (PS) -12752 + (NN) -2666 + (LL) -988
1D Compatibility (HY) -22000 + (ID) 6250
Total energy: -84917.0 ( -135.65 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_2OAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAR-query.scw
PDB file :
Tito_Scwrl_2OAR.pdb
: