Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKS--VSAS---GDTLGAVISDLEANY--SGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2QJL Chain:A ((2-99))
VNVKVEFLGGLDAIFGKQRVHKIKMDKEDPVTVGDLIDHIVSTMINNPNDVSIFIED--DSIRPGIITLINDTDWELEGEKDYILEDGDIISFTSTLHGG
General information:
TITO was launched using:
RESULT:
Template:
2QJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50550 for 609 contacts (-83.0/contact) +
2D Compatibility (PS) -10103 + (NN) -4145 + (LL) -168
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -72666.0 ( -119.32 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2QJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QJL-query.scw
PDB file :
Tito_Scwrl_2QJL.pdb
: