Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVPGAPSRPASAVSRPSYRQCVQASAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLVFSMDLGMCLNRFTYDSKLAPSRPQVVACDSREARIRNDGFHANAPSCMRIDYELITQNHRAYYCLKYLVRVGYCYPAVTTPGKPPSVLLYAPSACDESLPSPRVATALVPG---TRSANREFSRFVVTEIKSLGAGGRCDSASVSLQPPEEIEGPAIPPASSQLVCVAPK |
1EMW Chain:A ((1-88)) | ---------------------------------------------------------------------------------------------------------------------MVKIRLARFGSKHNPH----YRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWL-------------KVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEAREGA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34539 for 546 contacts (-63.3/contact) +
2D Compatibility (PS) -8664 + (NN) 228 + (LL) 9520
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -34455.0 ( -63.10 by residue)
QMean score : 0.226
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