Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGI-A-T--GATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIA-GSSPLWSRQL---FV-EG----RWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAV-VIGWGLAGYLWAATAGAVAWLLMLMA--S-PTARS---A-ASL-LTPGGIATFVRGAAHSITAAGASAILVMGF-PVLLKVTSDQLGAKGGAVILAVTLTRAPLLV--PLSAMQGNLIAHFVDR--RTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQT-----GGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVS-ATVASTLL--LLLP--MPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 3W4T Chain:A ((14-447)) | ------------------------GDPKKAIVRLSIAMMIGMSVQTLYNLADGIW-VSGLGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEG-----ADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFSPSREILKDILRVGLPSSLSQLSMSI-AMFFLNSVAIT-A-GGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTY-----VIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305503 for 3309 contacts (-92.3/contact) +
2D Compatibility (PS) -40422 + (NN) -11092 + (LL) 2492
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -363175.0 ( -109.75 by residue)
QMean score : 0.234
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