Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEIWRGVTSEGAEARWYSEAQEVSDDSPALAQPAVPNYRGSCWIPFSIELEGDA----ASFVGEIGKILADSVEQLQAAAFVNGSGNGEPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQ-ASAAFAANLSTINTLRQAETSNGALKFPSLHDSPPMLAG-KSVLEVSHMDTVDSAVTATNHPLVLGDWK--QFLIGDRVGSMVELVPHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
3DKT Chain:A ((67-264)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WGLRKSLPLIELRATFTLDLWELDNLERGKPNVDLSSLEETVRKVAEFEDEVIFRGCEKSGVKGLLSFEERK----IECGSTPKDLLEAIVRALSIFSKDGIEGPYTLVINTDRWINFLKEEA--GHYPLEKR---VEECLRGGKIITTPRIE--------D---ALVVSERGGDFKLILGQDLSIGYEDR-------EKDAVRLFITETFTFQVVNPEALILLK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60094 for 1298 contacts (-46.3/contact) +
2D Compatibility (PS) -20205 + (NN) -113 + (LL) 16608
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -70154.0 ( -54.05 by residue)
QMean score : 0.271
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