Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE--VTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-VDVVRGRMSQDELTRRVTALTSR
3C71 Chain:A ((8-126))
----------------------------------------------------NFVLEDTNGKRIELSDLKGKGVFLNFWGTWCPHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTE-------------
General information:
TITO was launched using:
RESULT:
Template:
3C71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73263 for 834 contacts (-87.8/contact) +
2D Compatibility (PS) -12361 + (NN) -4171 + (LL) 4920
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -97025.0 ( -116.34 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3C71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C71-query.scw
PDB file :
Tito_Scwrl_3C71.pdb
: