Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLY------GSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
3CJD Chain:A ((10-127))-------------KAALREKLIDLAEAQIEAEGLASLRARELARQADCAVGAIYTHFQDLNALTLEVNGRTFARLGAAVG-------DDHPNERLIAMSHAYLAFAREHPKLWRALFDVEMRSDGPVPQWY-------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -57040 for 649 contacts (-87.9/contact) +
2D Compatibility (PS) -11798 + (NN) -6976 + (LL) 8620
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -74044.0 ( -114.09 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_3CJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJD-query.scw
PDB file : Tito_Scwrl_3CJD.pdb: