Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIA-ESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPV-QLTARVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERPNAGRHLAFSTGRHFCLGAALARAEGEVGL-RTFFDRFPDVRAAGAGS--RRDTRVLRGWSTLPVTLGPARSMVSP |
| 3A4H Chain:A ((85-403)) | ------------------------------------------------------------------------------------------------------------PMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTD-GPVDLMREYAFQIPVQVICELLGVPAEDRD---DFSAWSSVLVDDS-PADDKNAAMGKLHGY---LSDLLERKRTEPDDALLSSLLAVSDEDGD---RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASG-GVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175032 for 2407 contacts (-72.7/contact) +
2D Compatibility (PS) -33672 + (NN) -15438 + (LL) 8280
1D Compatibility (HY) -25600 + (ID) 6650
Total energy: -248112.0 ( -103.08 by residue)
QMean score : 0.451
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