Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTRPREIYLATAVSIGILLSLIAPLGPPLARADGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
2FP1 Chain:B ((3-166))
-----------------------------------TSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
General information:
TITO was launched using:
RESULT:
Template:
2FP1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49895 for 1224 contacts (-40.8/contact) +
2D Compatibility (PS) -17849 + (NN) -12237 + (LL) 2560
1D Compatibility (HY) -18000 + (ID) 8200
Total energy: -103621.0 ( -84.66 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2FP1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FP1-query.scw
PDB file :
Tito_Scwrl_2FP1.pdb
: