Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-----DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT-TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI-ARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW |
1IY8 Chain:A ((14-267)) | --------RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAAY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162926 for 2135 contacts (-76.3/contact) +
2D Compatibility (PS) -26376 + (NN) -783 + (LL) 260
1D Compatibility (HY) -10400 + (ID) 4400
Total energy: -204625.0 ( -95.84 by residue)
QMean score : 0.377
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