Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMY--RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
2CPG Chain:A ((2-43))
-----KKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQ-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CPG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6721 for 181 contacts (-37.1/contact) +
2D Compatibility (PS) -4677 + (NN) -5052 + (LL) 1688
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -17112.0 ( -94.54 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2CPG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CPG-query.scw
PDB file :
Tito_Scwrl_2CPG.pdb
: