Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVLATHGDTARV-----FALASVTKPLVARAAQVAVEEGVVNLDTPAGP----------PGSTVRHLLAHTSG-------LAMHSDQALAR-----------PGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLD------------------------GGPAAAGFGATSTVADLAVFAGDLLRPSTVSA--QMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKS-------PHWTGE------CNSTRTFGHFGQSGGF---IWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
4HEF Chain:A ((43-343)) | -------------------------LASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAALAQYAQGYGKRDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWE-AYDWPISLKRLQAGNSTPMALQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNY-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91331 for 1802 contacts (-50.7/contact) +
2D Compatibility (PS) -25167 + (NN) -13628 + (LL) 3336
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -142640.0 ( -79.16 by residue)
QMean score : 0.315
|
|
|