Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDR-QADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTN-VILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV-VATEEPARLL-SQFIHGIKTLPVTWS |
| 4TRI Chain:A ((29-394)) | ------------------------------------------------------WMRANEPVFRDRNGLAAATTYQAVLDAERNPELFSSTGGIR-PDQ-PGMP----YMIDMDDPQHLLRRKLVNAGFTRK---RVMDKV-DSIGRLCDTLIDAVCERGECDFVRDIAAPLPMAVIGDMLGVLPTERDMLLKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVD-LLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHVAF-GFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADDAPVPLRPANFVSGPESMPVVFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194977 for 2962 contacts (-65.8/contact) +
2D Compatibility (PS) -38489 + (NN) -16921 + (LL) 3596
1D Compatibility (HY) -27600 + (ID) 6950
Total energy: -281341.0 ( -94.98 by residue)
QMean score : 0.501
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